STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
pspAPhage shock protein A homolog. (226 aa)    
Predicted Functional Partners:
ydjG
Conserved protein YdjG.
 
  
 0.988
ydjH
Conserved membrane protein YdjH.
 
  
 0.976
ydjI
Conserved protein YdjI.
 
  
 0.963
yvlC
PspC.
  
 
 0.941
levR
Transcriptional regulator (NifA/NtrC family).
   
 
 0.797
liaI
Conserved membrane protein LiaI.
  
  
 0.775
BL03174
Two-component sensor histidine kinase.
    
 
 0.708
mleA
Malolactic enzyme.
      
 0.579
bhlA
Holin-like protein.
      
 0.485
liaF
Conserved protein LiaF.
  
  
 0.450
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.