STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
yisQProbable transporter YisQ. (446 aa)    
Predicted Functional Partners:
yisR
Probable transcriptional regulator.
 
     0.632
ykkC
Putative membrane protein,probable transporter; Probably involved in guanidinium transport.
      
 0.606
ydgH
Hypothetical protein.
  
   
 0.548
ebrA
Multidrug resistance protein EbrA; Part of a multidrug efflux pump. Confers resistance to cationic lipophilic dyes such as ethidium bromide, acriflavine, pyronine Y and safranin O. The efflux is probably coupled to an influx of protons (By similarity).
      
 0.536
ebrB
Multidrug resistance protein EbrB; Part of a multidrug efflux pump. Confers resistance to cationic lipophilic dyes such as ethidium bromide, acriflavine, pyronine Y and safranin O. The efflux is probably coupled to an influx of protons (By similarity).
      
 0.535
BL01313
Nitrogen-regulated PII-like protein.
       0.528
BL01340
N-acetyltransferase.
       0.508
BL02218
Nucleic acid-binding protein.
   
    0.486
BL01314
Ammonium transporter.
       0.480
ykkD
Conserved hypothetical protein YkkD; Probably involved in guanidinium transport.
      
 0.466
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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