STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BL01323Conserved hypothetical protein. (413 aa)    
Predicted Functional Partners:
yrvJ
N-acetylmuramoyl-L-alanine amidase YrvJ.
  
 
  0.764
guaA
GMP synthetase; Catalyzes the synthesis of GMP from XMP.
    
  0.740
cwlC
N-acetylmuramoyl-L-alanine amidase.
   
 
  0.733
ywzC
YwzC; Belongs to the UPF0741 family.
  
     0.669
BL01322
Two-component sensor histidine kinase.
       0.600
BL01321
Two-component response regulator.
       0.593
yqgB
Conserved membrane protein YqgB.
  
     0.583
BL00251
Putative D-alpha-glycerophosphatase; RamB 25kDa protein with identical N-terminal sequence was characterised to be D-alpha-glycerophosphatase in ATCC9789, Fords type B.licheniformis by Skraly and Cameron, pira changed name from mtnX to BL.
  
     0.489
yqfZ
Conserved protein YqfZ.
  
     0.447
yfiQ
Putative Acyltransferase 3 YfiQ.
  
     0.441
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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