STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BL01335Putative L-2,4-diaminobutyrate decarboxylase. (503 aa)    
Predicted Functional Partners:
BL01336
4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 0.994
BL01332
Siderophore biosynthesis protein.
 
   
 0.951
BL01334
Putative Siderophore biosynthesis protein.
 
  
 0.949
BL01333
Siderophore biosynthesis protein.
 
     0.948
BL01331
Siderophore biosynthesis protein.
 
  
 0.944
BL02887
Putative aminoacid decarboxylase.
  
  
 
0.924
BL01735
Putative L-2,4-diaminobutyrate decarboxylase.
  
  
 
0.923
yisV
Putative transcriptional regulator.
       0.412
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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