STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amyDSugar transporter AmyD. (307 aa)    
Predicted Functional Partners:
amyC
Maltose transport protein AmyC.
 0.996
msmX
Multiple sugar-binding transport ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.987
msmE
Multiple sugar-binding protein MsmE.
 
 0.979
yvfM
Binding-protein-dependent transport system, inner membrane component protein.
 0.951
mdxG
MdxG - part of ABC transport system for maltodextrins, membrane spanning component.
 0.943
araQ
Integral membrane protein.
  0.920
BL01931
Binding-protein-dependent transport systems inner membrane component.
  0.920
BL02682
Binding-protein-dependent transport systems inner membrane component.
  0.920
lplC
Transmembrane lipoprotein.
 
  0.920
yesQ
Probable transporter permease protein YesQ.
  0.920
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.