STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
msmRTranscriptional regulator MsmR. (345 aa)    
Predicted Functional Partners:
msmE
Multiple sugar-binding protein MsmE.
 
    0.801
gltA
Glutamate synthase (large subunit).
    
 
 0.789
bglP
Phosphotransferase system (PTS) beta-glucoside-specific enzyme IIBCA component.
    
 0.773
BL01947
Phosphotransferase system (PTS) beta-glucoside-specific enzyme IIBCA component.
    
 0.773
BL02334
Phosphotransferase system (PTS) beta-glucoside-specific enzyme IIBCA component.
    
 0.773
ptsG
Phosphotransferase system (PTS) glucose-specific enzyme IICBA component.
    
 0.773
dhbF
DhbF.
    
 
 0.737
BL01178
Transcriptional regulator (LacI family).
  
     0.704
lchAC
Lichenysin synthetase C.
    
   0.636
ptsH
Histidine-containing phosphocarrier protein of the phosphotransferase system (PTS) (HPr protein).
    
   0.615
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.