STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
prkASerine protein kinase. (631 aa)    
Predicted Functional Partners:
yhbH
Putative stress response protein YhbH; Belongs to the UPF0229 family.
 
  
 0.989
spoVR
Stage V sporulation protein R, spoVR.
 
  
 0.978
glgA
Starch synthase, glycosyl transferase family 5; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
   
    0.708
cotE
Morphogenic protein.
  
    0.708
spoIVA
Sporulation Stage IV protein A SpoIVA; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
   
  
 0.664
ytbE
Aldo/keto reductase YtbE.
   
    0.646
yvgN
Putative 2,5-diketo-D-gluconic acid reductase YvgN.
   
    0.646
yhcB
Putative Flavodoxin/nitric oxide synthase YhcB.
  
    0.628
mrgA
Metalloregulation DNA-binding stress protein; Belongs to the Dps family.
   
    0.620
dps
DNA-protecting protein; Belongs to the Dps family.
   
    0.620
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.