STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yolFPhospholipase/carboxylesterase family protein. (201 aa)    
Predicted Functional Partners:
ydfO
Glyoxalase domain protein YdfO.
  
 0.985
ykcA
Glyoxalase/Bleomycin resistance protein/dioxygenase domain superfamily protein.
  
 0.974
yfiE
Glyoxalase I YfiE.
 
    0.660
dnaK
Class I heat-shock protein (molecular chaperone); Acts as a chaperone; Belongs to the heat shock protein 70 family.
    
 0.611
cypE
Cytochrome P450 / NADPH-ferrihemoprotein reductase; In the N-terminal section; belongs to the cytochrome P450 family.
   
 
  0.590
BL00458
Hypothetical protein.
    
  0.585
ywrF
Conserved protein YwrF.
 
    0.577
yqhO
Conserved protein YqhO.
    
  0.571
yqkD
Conserved protein YqkD.
     
 0.510
BL03078
Conserved hypothetical protein; Molecular Function: catalytic activity.
     
 0.510
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.