STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cwlSgamma-D-glutamate-meso-diaminopimelate muropeptidase (major autolysin) (CWBP49'). (435 aa)    
Predicted Functional Partners:
yoeB
Conserved hypothetical protein YoeB.
    
 
 0.842
BL03515
Glycoside Hydrolase Family 73.
 
 
 0.826
ctpB
Peptidase S41A, C-terminal protease; Belongs to the peptidase S41A family.
  
 
 0.704
flhP
Flagellar hook-basal body protein.
   
   0.694
flhO
Flagellar basal-body rod protein.
   
   0.686
motA
Motility protein A.
  
    0.672
fliD
Flagellar hook-associated protein FliD; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
  
  
 0.643
fliS
Flagellar protein FliS.
  
    0.635
motB
Motility protein B.
  
    0.635
yfmS
Putative chemotaxis sensory transducer YfmS.
   
  
 0.634
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.