STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yojOVon Willebrand factor, type A domain containing protein. (637 aa)    
Predicted Functional Partners:
yojN
Putative nitric oxide reductase.
 
  
 0.983
BL01473
Nitric oxide reductase cytochrome b subunit.
  
  
 0.833
BL02790
Hypothetical protein.
  
     0.726
ypeQ
Hypothetical protein.
  
     0.648
yqgW
Conserved protein YqgW.
  
     0.643
BL03723
Hypothetical protein.
  
     0.612
ebrB
Multidrug resistance protein EbrB; Part of a multidrug efflux pump. Confers resistance to cationic lipophilic dyes such as ethidium bromide, acriflavine, pyronine Y and safranin O. The efflux is probably coupled to an influx of protons (By similarity).
      
 0.611
BL00644
Hypothetical protein.
  
     0.608
ytpI
Conserved membrane protein YtpI.
  
     0.607
hpr
Transcriptional regulator Hpr; Negative regulator of protease production and sporulation.
  
   
 0.600
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.