STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yodFNa+/solute symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (493 aa)    
Predicted Functional Partners:
BL01461
Hypothetical protein.
 
    0.946
ycgM
Putative proline dehydrogenase YcgM.
 
  
 0.725
BL03174
Two-component sensor histidine kinase.
   
 
 0.637
cstA
Carbon starvation-induced protein.
  
    0.567
BL05216
Putative transposase part of IS element.
       0.511
BL05217
Putative transposase, part of IS element.
       0.511
yfmO
Putative multidrug efflux protein.
  
    0.437
yveA
Amino acid/polyamine transporter I.
  
    0.421
citA
Citrate synthase I; Belongs to the citrate synthase family.
  
    0.417
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.