STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BL01467Putative choline esterase. (378 aa)    
Predicted Functional Partners:
yqhO
Conserved protein YqhO.
    
 0.632
nos
Nitric oxide synthase Nos; Catalyzes the production of nitric oxide. Belongs to the NOS family. Bacterial NOS oxygenase subfamily.
  
     0.614
lchAD
Thioesterase LchAD.
  
     0.611
yqjL
YqjL.
  
     0.583
yesE
Conserved protein YesE.
  
     0.533
celB
Glycoside Hydrolase Family 48.
  
     0.523
BL00160
Hypothetical Bipartite response regulator, C-terminal effector.
  
     0.486
BL02849
Conserved hypothetical protein; Putative thioesterase.
  
    0.484
BL02884
1-acylglycerol-3-phosphate O-acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
     
 0.483
ypkP
Conserved hypothetical protein.
     
 0.483
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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