STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
yqhQConserved membrane protein YqhQ. (317 aa)    
Predicted Functional Partners:
yqhP
Conserved membrane protein YqhP.
  
    0.902
ywkE
YwkE; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.
      0.729
yqhR
Conserved membrane protein YqhR.
       0.628
yqhS
3-dehydroquinate dehydratase YqhS; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.
 
     0.609
rocF
Arginase; Belongs to the arginase family.
   
    0.601
BL02695
Arginase; BL02695 similar to rocF from Bacillus subtilis; Belongs to the arginase family.
   
    0.601
BL02698
Arginase; Belongs to the arginase family.
   
    0.601
speB
Agmatinase; Belongs to the arginase family.
   
    0.601
sirB
Cobalamin (vitamin B12) biosynthesis CbiX protein.
   
    0.553
yqhT
Peptidase M24B, X-Pro dipeptidase YqhT.
       0.548
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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