STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
spoIIIADSpoIIIAD. (121 aa)    
Predicted Functional Partners:
spoIIIAE
SpoIIIAE.
 
  
 0.989
spoIIIAF
SpoIIIAF.
 
  
 0.986
spoIIIAC
SpoIIIAC.
 
  
 0.985
spoIIIAB
SpoIIIAB.
 
  
 0.965
spoIIIAG
SpoIIIAG.
 
  
 0.962
spoIIIAA
SpoIIIAA.
 
  
 0.949
spoIIIAH
SpoIIIAH.
 
  
 0.877
spoIVA
Sporulation Stage IV protein A SpoIVA; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
  
    0.869
spoIVB
Serine peptidase SpoIVB.
 
     0.810
yqfC
Conserved hypothetical protein YqfC.
  
  
 0.809
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.