STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
comGDProbably part of the DNA transport machinery ComGD. (137 aa)    
Predicted Functional Partners:
comGC
ComGC; Required for transformation and DNA binding.
  
  
 0.989
comGA
ComGA.
  
 
 0.985
comGB
Probably part of the DNA transport machinery ComGB.
  
  
 0.980
comGF
Probably part of the DNA transport machinery ComGF.
  
  
 0.969
comGE
Probably part of the DNA transport machinery ComGE.
  
    0.959
comGG
Probably part of the DNA transport machinery ComGG.
  
  
 0.952
comFA
Late competence protein.
   
  
 0.866
comEC
ComEC.
  
  
 0.850
yqzE
YqzE.
  
    0.829
comFC
Competence protein.
  
  
 0.752
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.