STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
comGBProbably part of the DNA transport machinery ComGB. (344 aa)    
Predicted Functional Partners:
comGA
ComGA.
 
 
 0.999
comGD
Probably part of the DNA transport machinery ComGD.
  
  
 0.982
comGC
ComGC; Required for transformation and DNA binding.
 
  
 0.972
comGF
Probably part of the DNA transport machinery ComGF.
  
  
 0.943
comGE
Probably part of the DNA transport machinery ComGE.
  
  
 0.936
comC
DNA-binding protein.
 
  
 0.916
comGG
Probably part of the DNA transport machinery ComGG.
  
  
 0.865
comEC
ComEC.
  
  
 0.843
comEA
ComEA.
  
  
 0.814
comFA
Late competence protein.
   
  
 0.771
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.