STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BL01574Conserved protein YqgZ; Belongs to the ArsC family. (125 aa)    
Predicted Functional Partners:
rpoA
RNA polymerase (alpha subunit); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.813
yjbH
Conserved protein YjbH; Belongs to the UPF0413 family.
    
 
 0.769
gspA
Glycosyl Transferase Family 8.
  
    0.625
yflT
Conserved hypothetical protein YflT; General stress protein.
   
    0.619
ywjC
YwjC.
   
    0.595
yqgY
Conserved protein YqgY.
       0.567
yqhA
Putative sulphate transporter YqhA.
  
    0.563
ohrB
Organic hydroperoxide resistance protein, sigmaB regulon.
   
    0.456
ohrA
Organic hydroperoxide resistance protein OhrA.
   
    0.456
comGC
ComGC; Required for transformation and DNA binding.
 
     0.439
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.