STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yqgXConserved protein YqgX. (212 aa)    
Predicted Functional Partners:
yrkF
YrkF; Belongs to the sulfur carrier protein TusA family.
  
 0.838
ykcA
Glyoxalase/Bleomycin resistance protein/dioxygenase domain superfamily protein.
   
 
  0.717
BL02060
Metallo-beta-lactamase/rhodanese-like domain protein.
  
 
0.680
yrkH
Conserved protein YrkH.
  
 
0.648
yqgW
Conserved protein YqgW.
       0.584
ysfC
Glycolate oxidase subunit GlcD.
     
 0.563
ytwF
Conserved protein YtwF.
   
 0.539
dhbF
DhbF.
   
 
 0.468
ytqB
Conserved protein YtqB.
  
 
   0.463
BL00160
Hypothetical Bipartite response regulator, C-terminal effector.
    
   0.461
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.