STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BL01582N-acetylmuramoyl-L-alanine amidase. (359 aa)    
Predicted Functional Partners:
BL05342
Holinlike protein.
  
    0.629
BL03522
Hyopothetical phage related protein, involved in cell lysis.
  
    0.628
cwlC
N-acetylmuramoyl-L-alanine amidase.
  
 0.556
yrvJ
N-acetylmuramoyl-L-alanine amidase YrvJ.
    
  0.494
yomQ
Hypothetical phage like protein.
  
    0.477
BL03515
Glycoside Hydrolase Family 73.
       0.468
BL03519
Hypothetical phagelike protein.
  
    0.468
BL03521
Hypothetical protein.
       0.460
BL03512
Hypothetical phage tail like protein.
  
    0.455
BL03517
Hypothetical phagelike protein.
       0.427
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.