STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yknXPutative secretion protein, protein transporter; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (378 aa)    
Predicted Functional Partners:
yknZ
Putative ABC transporter permease.
 
 
 0.990
swrC
Swarming and motility protein SwrC; Involved in the efflux of surfactin; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.978
yknY
ABC transporter.
 
 
 0.968
yknW
Conserved hypothetical protein.
 
  
 0.959
BL00256
ABC transport system permease protein.
  
 
 0.826
yxdM
GTP-binding signal recognition particle (SRP54) G-domain.
  
 
 0.826
bglP
Phosphotransferase system (PTS) beta-glucoside-specific enzyme IIBCA component.
     
 0.745
BL01947
Phosphotransferase system (PTS) beta-glucoside-specific enzyme IIBCA component.
     
 0.745
BL02334
Phosphotransferase system (PTS) beta-glucoside-specific enzyme IIBCA component.
     
 0.745
ptsG
Phosphotransferase system (PTS) glucose-specific enzyme IICBA component.
     
 0.745
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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