STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ampSAminopeptidase. (410 aa)    
Predicted Functional Partners:
yusX
Peptidase M, neutral zinc metallopeptidases.
 
   
 0.628
ykvY
Peptidase M24,putative metallopetidase.
     
 0.615
pepT
Peptidase T (tripeptidase); Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family.
  
  
 0.580
ykpC
Hypothetical protein.
       0.546
ywaD
Aminopeptidase.
      
 0.539
ydiC
Peptidase M22, glycoprotease YdiC.
      
 0.531
yhjG
Putative Flavoprotein monooxygenase.
  
 
 0.488
BL03911
4-hydroxybenzoate 3-monooxygenase.
  
 
 0.488
mreBH
Cell-shape determining protein.
       0.443
yhfE
Putative glucanase/aminopeptidase YhfE.
  
  
 0.432
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.