STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BL01636Hypothetical YdjC-like protein; Probably catalyzes the deacetylation of acetylated carbohydrates an important step in the degradation of oligosaccharides. (246 aa)    
Predicted Functional Partners:
licH
Glycoside Hydrolase Family 4.
 
 
  0.796
BL01803
Glycoside Hydrolase Family 4.
 
 
  0.792
BL01637
Phosphotransferase system (PTS) N-acetylglucosamine-specific enzyme IICB component.
       0.758
ybgF
Amino acid permease YbgF.
       0.487
ybgG
Homocysteine S-methyltransferase YbgG.
       0.487
mtaA
Transcriptional regulator; MerR family.
       0.482
BL01921
Phosphotransferase system (PTS) lichenan-specific enzyme IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
 
   
 0.447
ycbP
Hypothetical protein.
       0.443
glvA
Glycoside Hydrolase,Family 4, GlvA; 6-phospho-alpha-glucosidase.
 
    0.433
ywbA
PTS lactose/cellobiose IIC component,PTS system cellobiose-specific IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
 
   
 0.404
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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