STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
blaPBeta-lactamase precursor. (307 aa)    
Predicted Functional Partners:
blaI
Putative beta-lactamase repressor protein.
 
   
 0.741
blaRI
Penicillin-binding protein, transpeptidase domain,Peptidase M56, BlaR1.
 
   
 0.724
BL05386
Transcriptional repressor.
  
   
 0.682
dacC
Penicillin-binding protein (D-alanyl-D-alanine carboxypeptidase).
  
  
 0.611
ykfB
Putative muconate cycloisomerase.
     
 0.591
ykfC
Putative hydrolase.
     
 0.577
ykfD
Oligopeptide/dipeptide ABC transporter YkfD; Belongs to the ABC transporter superfamily.
      
 0.565
ctpB
Peptidase S41A, C-terminal protease; Belongs to the peptidase S41A family.
    
  0.556
mecB
Negative regulator of genetic competence; Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis. Acts negatively in the development of competence by binding ComK and recruiting it to the ClpCP protease. When overexpressed, inhibits sporulation. Also involved in Spx degradation by ClpC.
      
 0.487
phoD
Phosphodiesterase/alkaline phosphatase D.
 
     0.483
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.