Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
aroA | kdgD | BL00056 | BL01645 | 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase and chorismate mutase-isozyme 3. | Probable 5-dehydro-4-deoxyglucarate dehydratase KdgD; Belongs to the DapA family. | 0.621 |
asd | dapB | BL01210 | BL02758 | Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate. | 0.888 |
asd | kdgD | BL01210 | BL01645 | Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | Probable 5-dehydro-4-deoxyglucarate dehydratase KdgD; Belongs to the DapA family. | 0.622 |
asd | serA | BL01210 | BL00647 | Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | Phosphoglycerate dehydrogenase SerA; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.647 |
dapB | asd | BL02758 | BL01210 | Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate. | Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.888 |
dapB | kdgD | BL02758 | BL01645 | Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate. | Probable 5-dehydro-4-deoxyglucarate dehydratase KdgD; Belongs to the DapA family. | 0.777 |
garD | gudD | BL01651 | BL01649 | Galactarate dehydratase. | Mandelate racemase/muconate lactonizing enzyme; Glucarate dehydratase. | 0.930 |
garD | gudP | BL01651 | BL01648 | Galactarate dehydratase. | D-galactonate transporter. | 0.770 |
garD | kdgD | BL01651 | BL01645 | Galactarate dehydratase. | Probable 5-dehydro-4-deoxyglucarate dehydratase KdgD; Belongs to the DapA family. | 0.892 |
garD | ycbG | BL01651 | BL01650 | Galactarate dehydratase. | Putative regulatory protein YcbG. | 0.746 |
gatC | kdgD | BL00600 | BL01645 | glutamyl-tRNA(Gln) amidotransferase (subunit C); Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family. | Probable 5-dehydro-4-deoxyglucarate dehydratase KdgD; Belongs to the DapA family. | 0.598 |
gudD | garD | BL01649 | BL01651 | Mandelate racemase/muconate lactonizing enzyme; Glucarate dehydratase. | Galactarate dehydratase. | 0.930 |
gudD | gudP | BL01649 | BL01648 | Mandelate racemase/muconate lactonizing enzyme; Glucarate dehydratase. | D-galactonate transporter. | 0.892 |
gudD | kdgD | BL01649 | BL01645 | Mandelate racemase/muconate lactonizing enzyme; Glucarate dehydratase. | Probable 5-dehydro-4-deoxyglucarate dehydratase KdgD; Belongs to the DapA family. | 0.959 |
gudD | ybcD | BL01649 | BL01646 | Mandelate racemase/muconate lactonizing enzyme; Glucarate dehydratase. | Aldehyde dehydrogenase YbcD; Belongs to the aldehyde dehydrogenase family. | 0.664 |
gudD | ycbG | BL01649 | BL01650 | Mandelate racemase/muconate lactonizing enzyme; Glucarate dehydratase. | Putative regulatory protein YcbG. | 0.677 |
gudP | garD | BL01648 | BL01651 | D-galactonate transporter. | Galactarate dehydratase. | 0.770 |
gudP | gudD | BL01648 | BL01649 | D-galactonate transporter. | Mandelate racemase/muconate lactonizing enzyme; Glucarate dehydratase. | 0.892 |
gudP | kdgD | BL01648 | BL01645 | D-galactonate transporter. | Probable 5-dehydro-4-deoxyglucarate dehydratase KdgD; Belongs to the DapA family. | 0.688 |
gudP | ybcD | BL01648 | BL01646 | D-galactonate transporter. | Aldehyde dehydrogenase YbcD; Belongs to the aldehyde dehydrogenase family. | 0.714 |
page 1 of 3