STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BL01663Antibacterial protein. (275 aa)    
Predicted Functional Partners:
lytB
Modifier protein of major autolysin LytC (CWBP76).
  
 
 0.755
BL01664
Hypothetical protein.
       0.651
ydcC
Conserved membrane protein YdcC.
    
   0.532
BL01661
Putative Proteinase inhibititor I4, serpin; Belongs to the serpin family.
       0.512
gluP
TPR motif integral membrane protein GluP.
  
   0.495
ydcA
Conserved membrane protein YdcA.
   
   0.481
ctpB
Peptidase S41A, C-terminal protease; Belongs to the peptidase S41A family.
  
 
 0.460
ydaN
Putative cellulose synthase.
   
  0.441
cwlC
N-acetylmuramoyl-L-alanine amidase.
   
  0.441
blaSE
Glutamyl Endo peptidase; Specific for hydrolysis of peptide bonds on the carboxyl side of acidic amino acid residues, with a strong preference for Glu.
     
 0.416
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.