STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
chiConserved protein, Glycoside Hydrolase Family 18; Chitnase; Belongs to the glycosyl hydrolase 18 family. (598 aa)    
Predicted Functional Partners:
chiA
Chitinase precursor, Glycoside Hydrolase Family 18.
 
 
0.990
ybbD
Glycoside hydrolase, family 3; Probable beta-hexosaminidase; Belongs to the glycosyl hydrolase 3 family.
     
 0.924
chbB
Putative chitin binding protein; Paha thinks this maybe a GH61.
 
  
 0.917
BL00055
Hypothetical protein.
  
 
 
 0.896
smc
Chromosome segregation SMC protein homolg; Required for chromosome condensation and partitioning. Belongs to the SMC family.
    
 
 0.883
dhbF
DhbF.
  
  
 0.764
yjiC
Glycosyl transferase Family 1.
  
  
 0.589
celA
Glycoside Hydrolase Family 9.
  
   
 0.586
tpiA
Triose phosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
      
 0.583
BL00874
Phage related protein.
  
  
 0.573
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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