STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
yceDPutative stress response protein YceD. (193 aa)    
Predicted Functional Partners:
yceC
Putative stress response protein YceC.
 
   
0.980
yceE
Putative stress response protein YceE.
 
   
0.891
BL01698
Putative ATP/GTP-binding protein.
 
     0.891
yceG
Conserved hypothetical protein YceG.
 
  
 0.879
yceH
Putative signal peptide binding protein YceH; Belongs to the TelA family.
 
  
 0.844
yceF
Integral membrane protein TerC family, YceF.
  
  
 0.829
ysfC
Glycolate oxidase subunit GlcD.
      
 0.453
glpT
Glycerol-3-phosphate permease.
      
 0.450
yugJ
Iron-containing alcohol dehydrogenase YugJ.
      
 0.440
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.