Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| BL01183 | BL01698 | BL01183 | BL01698 | L-ribulose-5-phosphate 4-epimerase. | Putative ATP/GTP-binding protein. | 0.741 |
| BL01183 | araD | BL01183 | BL00350 | L-ribulose-5-phosphate 4-epimerase. | L-ribulose-5-phosphate 4-epimerase. | 0.408 |
| BL01183 | mtnB | BL01183 | BL03541 | L-ribulose-5-phosphate 4-epimerase. | Putative Methylthioribulose-1-phosphate dehydratase; Catalyzes the dehydration of methylthioribulose-1-phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P). In the N-terminal section; belongs to the HAD-like hydrolase superfamily. MtnX family. | 0.418 |
| BL01698 | BL01183 | BL01698 | BL01183 | Putative ATP/GTP-binding protein. | L-ribulose-5-phosphate 4-epimerase. | 0.741 |
| BL01698 | araD | BL01698 | BL00350 | Putative ATP/GTP-binding protein. | L-ribulose-5-phosphate 4-epimerase. | 0.741 |
| BL01698 | mtnB | BL01698 | BL03541 | Putative ATP/GTP-binding protein. | Putative Methylthioribulose-1-phosphate dehydratase; Catalyzes the dehydration of methylthioribulose-1-phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P). In the N-terminal section; belongs to the HAD-like hydrolase superfamily. MtnX family. | 0.741 |
| BL01698 | sucC | BL01698 | BL01285 | Putative ATP/GTP-binding protein. | succinyl-CoA synthetase (beta subunit); Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.675 |
| BL01698 | yceC | BL01698 | BL01694 | Putative ATP/GTP-binding protein. | Putative stress response protein YceC. | 0.855 |
| BL01698 | yceD | BL01698 | BL01695 | Putative ATP/GTP-binding protein. | Putative stress response protein YceD. | 0.861 |
| BL01698 | yceE | BL01698 | BL01696 | Putative ATP/GTP-binding protein. | Putative stress response protein YceE. | 0.871 |
| BL01698 | yceG | BL01698 | BL01699 | Putative ATP/GTP-binding protein. | Conserved hypothetical protein YceG. | 0.864 |
| BL01698 | yceH | BL01698 | BL01700 | Putative ATP/GTP-binding protein. | Putative signal peptide binding protein YceH; Belongs to the TelA family. | 0.782 |
| BL01698 | yusL | BL01698 | BL02180 | Putative ATP/GTP-binding protein. | 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase YusL. | 0.814 |
| araD | BL01183 | BL00350 | BL01183 | L-ribulose-5-phosphate 4-epimerase. | L-ribulose-5-phosphate 4-epimerase. | 0.408 |
| araD | BL01698 | BL00350 | BL01698 | L-ribulose-5-phosphate 4-epimerase. | Putative ATP/GTP-binding protein. | 0.741 |
| araD | mtnB | BL00350 | BL03541 | L-ribulose-5-phosphate 4-epimerase. | Putative Methylthioribulose-1-phosphate dehydratase; Catalyzes the dehydration of methylthioribulose-1-phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P). In the N-terminal section; belongs to the HAD-like hydrolase superfamily. MtnX family. | 0.418 |
| mtnB | BL01183 | BL03541 | BL01183 | Putative Methylthioribulose-1-phosphate dehydratase; Catalyzes the dehydration of methylthioribulose-1-phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P). In the N-terminal section; belongs to the HAD-like hydrolase superfamily. MtnX family. | L-ribulose-5-phosphate 4-epimerase. | 0.418 |
| mtnB | BL01698 | BL03541 | BL01698 | Putative Methylthioribulose-1-phosphate dehydratase; Catalyzes the dehydration of methylthioribulose-1-phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P). In the N-terminal section; belongs to the HAD-like hydrolase superfamily. MtnX family. | Putative ATP/GTP-binding protein. | 0.741 |
| mtnB | araD | BL03541 | BL00350 | Putative Methylthioribulose-1-phosphate dehydratase; Catalyzes the dehydration of methylthioribulose-1-phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P). In the N-terminal section; belongs to the HAD-like hydrolase superfamily. MtnX family. | L-ribulose-5-phosphate 4-epimerase. | 0.418 |
| sucC | BL01698 | BL01285 | BL01698 | succinyl-CoA synthetase (beta subunit); Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | Putative ATP/GTP-binding protein. | 0.675 |
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