STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
lamBinding-protein-dependent transport systems inner membrane component. (270 aa)    
Predicted Functional Partners:
BL01722
Putative extracellular solute-binding protein.
 
 0.999
BL01723
Multiple sugar-binding transport ATP-binding protein; BL01723 similar to msmX from Bacillus subtilis; Belongs to the ABC transporter superfamily.
 
 0.999
BL01724
Binding-protein-dependent transport systems inner membrane component.
0.999
BL01721
Hydantoin utilization protein B.
 
     0.819
BL01720
Hydantoin utilization protein A.
 
     0.809
comEC
ComEC.
     
 0.623
murB
UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation.
  
  
 0.560
msmX
Multiple sugar-binding transport ATP-binding protein; Belongs to the ABC transporter superfamily.
 
   
 0.549
folK
7,8-dihydro-6-hydroxymethylpterin pyrophosphokinase.
     
 0.529
yabO
Putative RNA-binding S4 protein YabO.
   
    0.473
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.