Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BL04025 | acpA | BL04025 | BL02316 | Conserved hypothetical protein. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. | 0.735 |
BL04025 | dhbB | BL04025 | BL04023 | Conserved hypothetical protein. | Isochorismatase. | 0.999 |
BL04025 | dhbC | BL04025 | BL04021 | Conserved hypothetical protein. | Isochorismate synthase. | 0.961 |
BL04025 | dhbE | BL04025 | BL04022 | Conserved hypothetical protein. | 2,3-dihydroxybenzoate-AMP ligase (enterobactin synthetase component E). | 0.985 |
BL04025 | dhbF | BL04025 | BL04024 | Conserved hypothetical protein. | DhbF. | 0.999 |
BL04025 | dltC | BL04025 | BL03932 | Conserved hypothetical protein. | D-alanyl carrier protein; Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC- carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall. | 0.735 |
BL04025 | lchAA | BL04025 | BL01726 | Conserved hypothetical protein. | Lichenysin synthetase A. | 0.999 |
BL04025 | lchAB | BL04025 | BL01727 | Conserved hypothetical protein. | Lichenysin synthetase B. | 0.999 |
BL04025 | lchAC | BL04025 | BL01728 | Conserved hypothetical protein. | Lichenysin synthetase C. | 0.999 |
BL04025 | lchAD | BL04025 | BL01729 | Conserved hypothetical protein. | Thioesterase LchAD. | 0.831 |
acpA | BL04025 | BL02316 | BL04025 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. | Conserved hypothetical protein. | 0.735 |
acpA | dhbB | BL02316 | BL04023 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. | Isochorismatase. | 0.869 |
acpA | dhbF | BL02316 | BL04024 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. | DhbF. | 0.980 |
acpA | lchAA | BL02316 | BL01726 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. | Lichenysin synthetase A. | 0.963 |
acpA | lchAB | BL02316 | BL01727 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. | Lichenysin synthetase B. | 0.978 |
acpA | lchAC | BL02316 | BL01728 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. | Lichenysin synthetase C. | 0.976 |
acpA | lchAD | BL02316 | BL01729 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. | Thioesterase LchAD. | 0.514 |
dhbB | BL04025 | BL04023 | BL04025 | Isochorismatase. | Conserved hypothetical protein. | 0.999 |
dhbB | acpA | BL04023 | BL02316 | Isochorismatase. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. | 0.869 |
dhbB | dhbC | BL04023 | BL04021 | Isochorismatase. | Isochorismate synthase. | 0.999 |
page 1 of 5