STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lchADThioesterase LchAD. (246 aa)    
Predicted Functional Partners:
lchAB
Lichenysin synthetase B.
 
 
 0.999
lchAC
Lichenysin synthetase C.
 
  
 0.999
dhbF
DhbF.
 
 
 0.999
lchAA
Lichenysin synthetase A.
 
 
 0.998
sfp
Phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily.
 
  
 0.869
dhbB
Isochorismatase.
 
  
 0.866
dhbE
2,3-dihydroxybenzoate-AMP ligase (enterobactin synthetase component E).
 
  
 0.850
BL04025
Conserved hypothetical protein.
 
  
 0.831
dltA
D-alanyl-D-alanine carrier protein ligase (Dcl); Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D- alanyl carrier protein (Dcp) DltC. In an ATP-dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall. Belongs to t [...]
 
  
 0.762
fabD
Malonyl CoA-acyl carrier protein transacylase.
 
 
 0.734
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.