STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
lchADThioesterase LchAD. (246 aa)    
Predicted Functional Partners:
lchAB
Lichenysin synthetase B.
 
  
 0.999
lchAC
Lichenysin synthetase C.
 
  
 0.999
lchAA
Lichenysin synthetase A.
 
  
 0.998
dhbF
DhbF.
 
  
 0.998
sfp
Phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily.
 
  
 0.886
dhbB
Isochorismatase.
 
  
 0.865
dhbE
2,3-dihydroxybenzoate-AMP ligase (enterobactin synthetase component E).
 
  
 0.834
BL04025
Conserved hypothetical protein.
 
  
 0.823
ribA
GTP cyclohydrolase II and 3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
   
    0.676
BL01467
Putative choline esterase.
  
     0.611
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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