STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
yclB3-octaprenyl-4-hydroxybenzoate carboxy-lyase YclB; Involved in the non-oxidative decarboxylation and detoxification of phenolic derivatives. Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for phenolic acid decarboxylase. (189 aa)    
Predicted Functional Partners:
yclC
Carboxylyase-related protein YclC; Involved in the non-oxidative decarboxylation and detoxification of phenolic derivatives.
 
 
 0.999
padC
Phenolic acid decarboxylase.
 
  
 0.937
nfrA2
NADPH-linked nitro/flavin reductase; Belongs to the flavin oxidoreductase frp family.
     
  0.900
thiM
Hydroxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family.
     
  0.900
nfrA1
FMN-containing NADPH-linked nitro/flavin reductase; Belongs to the flavin oxidoreductase frp family.
     
  0.900
nudF
ADP-ribose pyrophosphatase; Belongs to the Nudix hydrolase family.
     
  0.900
yclA
Transcriptional regulator YclA; Belongs to the LysR transcriptional regulatory family.
       0.536
yhcX
Conserved hypothetical protein YhcX.
     
 0.500
patB
Aminotransferase PatB.
      
 0.472
dhaS
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
      
 0.436
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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