Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| BL03911 | pyrK | BL03911 | BL02277 | 4-hydroxybenzoate 3-monooxygenase. | Dihydroorotate dehydrogenase (electron transfer subunit); Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD(+). | 0.521 |
| BL03911 | yclB | BL03911 | BL01740 | 4-hydroxybenzoate 3-monooxygenase. | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase YclB; Involved in the non-oxidative decarboxylation and detoxification of phenolic derivatives. Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for phenolic acid decarboxylase. | 0.543 |
| BL03911 | yclC | BL03911 | BL01741 | 4-hydroxybenzoate 3-monooxygenase. | Carboxylyase-related protein YclC; Involved in the non-oxidative decarboxylation and detoxification of phenolic derivatives. | 0.547 |
| dhaS | patB | BL00585 | BL02532 | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Aminotransferase PatB. | 0.542 |
| dhaS | yclB | BL00585 | BL01740 | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase YclB; Involved in the non-oxidative decarboxylation and detoxification of phenolic derivatives. Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for phenolic acid decarboxylase. | 0.560 |
| dhaS | yclC | BL00585 | BL01741 | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Carboxylyase-related protein YclC; Involved in the non-oxidative decarboxylation and detoxification of phenolic derivatives. | 0.643 |
| dhaS | yhcX | BL00585 | BL03168 | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Conserved hypothetical protein YhcX. | 0.787 |
| menH | yclC | BL02783 | BL01741 | Methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2). | Carboxylyase-related protein YclC; Involved in the non-oxidative decarboxylation and detoxification of phenolic derivatives. | 0.485 |
| patB | dhaS | BL02532 | BL00585 | Aminotransferase PatB. | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.542 |
| patB | yclB | BL02532 | BL01740 | Aminotransferase PatB. | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase YclB; Involved in the non-oxidative decarboxylation and detoxification of phenolic derivatives. Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for phenolic acid decarboxylase. | 0.529 |
| patB | yclC | BL02532 | BL01741 | Aminotransferase PatB. | Carboxylyase-related protein YclC; Involved in the non-oxidative decarboxylation and detoxification of phenolic derivatives. | 0.611 |
| patB | yhcX | BL02532 | BL03168 | Aminotransferase PatB. | Conserved hypothetical protein YhcX. | 0.454 |
| patB | ywkB | BL02532 | BL03977 | Aminotransferase PatB. | Auxin Efflux Carrier. | 0.526 |
| pyrK | BL03911 | BL02277 | BL03911 | Dihydroorotate dehydrogenase (electron transfer subunit); Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD(+). | 4-hydroxybenzoate 3-monooxygenase. | 0.521 |
| pyrK | yclC | BL02277 | BL01741 | Dihydroorotate dehydrogenase (electron transfer subunit); Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD(+). | Carboxylyase-related protein YclC; Involved in the non-oxidative decarboxylation and detoxification of phenolic derivatives. | 0.609 |
| pyrK | yhcX | BL02277 | BL03168 | Dihydroorotate dehydrogenase (electron transfer subunit); Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD(+). | Conserved hypothetical protein YhcX. | 0.490 |
| pyrK | yhjG | BL02277 | BL02996 | Dihydroorotate dehydrogenase (electron transfer subunit); Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD(+). | Putative Flavoprotein monooxygenase. | 0.521 |
| yclA | yclB | BL01831 | BL01740 | Transcriptional regulator YclA; Belongs to the LysR transcriptional regulatory family. | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase YclB; Involved in the non-oxidative decarboxylation and detoxification of phenolic derivatives. Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for phenolic acid decarboxylase. | 0.536 |
| yclA | yclC | BL01831 | BL01741 | Transcriptional regulator YclA; Belongs to the LysR transcriptional regulatory family. | Carboxylyase-related protein YclC; Involved in the non-oxidative decarboxylation and detoxification of phenolic derivatives. | 0.571 |
| yclB | BL03911 | BL01740 | BL03911 | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase YclB; Involved in the non-oxidative decarboxylation and detoxification of phenolic derivatives. Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for phenolic acid decarboxylase. | 4-hydroxybenzoate 3-monooxygenase. | 0.543 |
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