STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BL01744Putative Histidine kinase. (589 aa)    
Predicted Functional Partners:
BL01745
Transcriptional regulator; Putative 2 component system.
 
 
 0.982
BL01743
Ribose ABC transporter (ribose-binding protein); BL01743 similar to rbsB from Bacillus subtilis.
 
 
 0.949
lytT
Two-component response regulator.
 
 
 0.862
yesN
Two-component response regulator YesN.
 
 
 0.853
rbsB
Ribose ABC transporter (ribose-binding protein).
  
 
 0.655
yesM
Two-component sensor histidine kinase YesM.
  
  
 
0.640
yesS
Probable transcriptional regulator.
 
 
 0.621
lytS
Two-component sensor histidine kinase.
 
  
 
0.617
BL01748
Sugar ABC transporter (permease); BL01748 similar to rbsC from Bacillus subtilis; Belongs to the binding-protein-dependent transport system permease family.
 
   
 0.613
BL01746
Ribose ABC transporter (ribose-binding protein); BL01746 similar to rbsB from Bacillus subtilis.
 
     0.611
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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