STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BL01745Transcriptional regulator; Putative 2 component system. (400 aa)    
Predicted Functional Partners:
BL01744
Putative Histidine kinase.
 
 
 0.997
yesM
Two-component sensor histidine kinase YesM.
 
 
 0.969
yesN
Two-component response regulator YesN.
  
  
 
0.926
BL01743
Ribose ABC transporter (ribose-binding protein); BL01743 similar to rbsB from Bacillus subtilis.
 
     0.919
cheA
Two-component sensor histidine kinase CheA.
 
 
 0.784
yclK
Two-component sensor histidine kinase YclK.
 
     0.652
BL01748
Sugar ABC transporter (permease); BL01748 similar to rbsC from Bacillus subtilis; Belongs to the binding-protein-dependent transport system permease family.
 
     0.631
BL01746
Ribose ABC transporter (ribose-binding protein); BL01746 similar to rbsB from Bacillus subtilis.
 
     0.600
BL03174
Two-component sensor histidine kinase.
 
 
 
 0.589
spaR
SpaR; Regulatory protein.
  
     0.550
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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