STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yclPABC transporter; Probable ferrichrome transport system ATP-binding protein. (252 aa)    
Predicted Functional Partners:
yclO
Probable ferrichrome transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
 0.996
yclN
Probable ferrichrome transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.993
yclQ
Periplasmic binding protein; Probable ferrichrome transport system substrate-binding protein.
 
  
 0.993
yhfQ
Putative transferase.
  
  
 0.837
fhuD
Ferrichrome ABC transporter (ferrichrome-binding protein).
 
  
 0.816
yfiY
ABC transport system substrate-binding protein.
 
  
 0.776
BL00468
Periplasmic iron-binding protein.
 
    0.729
feuA
Iron-binding protein.
 
    0.705
BL03470
Periplasmic binding protein,putative iron transporter.
 
    0.692
yxeB
Periplasmic binding protein YxeB.
 
    0.669
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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