STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
yclQPeriplasmic binding protein; Probable ferrichrome transport system substrate-binding protein. (315 aa)    
Predicted Functional Partners:
yclP
ABC transporter; Probable ferrichrome transport system ATP-binding protein.
 
  
 0.998
yclN
Probable ferrichrome transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.997
yclO
Probable ferrichrome transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.996
yhfQ
Putative transferase.
  
  
0.693
fhuC
Ferrichrome ABC transporter (ATP-binding protein).
 
  
 0.688
yusV
ABC transporter.
 
  
 0.638
fhuD
Ferrichrome ABC transporter (ferrichrome-binding protein).
  
  
0.572
yfiY
ABC transport system substrate-binding protein.
  
  
0.560
BL03470
Periplasmic binding protein,putative iron transporter.
  
  
0.483
yxeB
Periplasmic binding protein YxeB.
  
  
0.482
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.