STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nasDAssimilatory nitrite reductase (subunit); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. (806 aa)    
Predicted Functional Partners:
nasE
Assimilatory nitrite reductase (subunit).
 
 0.998
nasC
Assimilatory nitrate reductase (catalytic subunit); Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 0.983
hmp
Flavohemoglobin; Belongs to the globin family.
  
 
 0.932
nasF
uroporphyrin-III C-methyltransferase.
 
  
 0.914
narK
Nitrite extrusion protein.
 
 
 0.900
nasA
Nitrate transporter.
 
 
 0.892
narG
Nitrate reductase (alpha subunit); Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.890
nasB
Assimilatory nitrate reductase (electron transfer subunit); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
 
  
 
0.782
narH
Nitrate reductase (beta subunit).
  
 
 0.732
narI
Nitrate reductase (gamma subunit).
  
 
 0.684
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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