STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BL01777Transketolase. (280 aa)    
Predicted Functional Partners:
BL05028
1-deoxyxylulose-5-phosphate synthase; BL05028 similar to dxs from Bacillus subtilis, transketolase.
 0.999
rpe
Ribulose-5-phosphate 3-epimerase Rpe; Belongs to the ribulose-phosphate 3-epimerase family.
 
 0.990
BL01776
Putative sugar phosphotransferase system protein.
 
    0.893
BL01775
Putative sugar phosphotransferase.
 
    0.837
BL02486
Putative Transaldolase.
 
  
 0.823
ywlF
Ribose/galactose isomerase.
    
 0.815
BL01774
Transcriptional regulator; BL01774 similar to mtlR from Bacillus subtilis.
 
    0.812
gapA
Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
    
  0.775
pyk
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
 
 0.754
bglP
Phosphotransferase system (PTS) beta-glucoside-specific enzyme IIBCA component.
    
  0.748
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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