STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sfpPhosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily. (226 aa)    
Predicted Functional Partners:
lchAA
Lichenysin synthetase A.
 
 0.979
dhbF
DhbF.
 
 0.960
lchAC
Lichenysin synthetase C.
 
 
 0.925
lchAB
Lichenysin synthetase B.
 
 0.915
fabF
Beta-ketoacyl-acyl carrier protein synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
  
 
 0.908
dhbB
Isochorismatase.
 
 
 0.889
lchAD
Thioesterase LchAD.
 
  
 0.869
fabD
Malonyl CoA-acyl carrier protein transacylase.
  
  
 0.829
fabI
Enoyl-acyl carrier protein reductase.
  
    0.810
yrpB
Putative Dihydroorotate dehydrogenase YrpB.
  
 
 0.748
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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