STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yckKPutative extracellular solute-binding protein, family 3 YckK; Belongs to the bacterial solute-binding protein 3 family. (268 aa)    
Predicted Functional Partners:
yckJ
ABC transporter permease protein YckJ; 3-TM region, His/Glu/Gln/Arg/opine,Binding-protein-dependent transport systems inner membrane component.
 0.999
yckI
ABC transporter YckI.
 
 0.998
yckA
Amino acid ABC transporter, permease protein YckA.
 0.985
artQ
High affinity arginine transport system permease protein.
 0.961
artM
ABC transporter.
 
 0.931
cheV
CheV.
   
 0.805
BL03174
Two-component sensor histidine kinase.
   
 0.796
aroA
3-deoxy-D-arabino-heptulosonate 7-phosphate synthase and chorismate mutase-isozyme 3.
    
 0.783
yckB
Putative extracellular solute-binding protein YckB; Belongs to the bacterial solute-binding protein 3 family.
  
  
0.683
BL03601
Putative ribonuclease.
  
   
 0.665
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.