STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glcUHexose transporter GlcU. (285 aa)    
Predicted Functional Partners:
gdh
Glucose 1-dehydrogenase.
 
  
 0.683
glcP
glucose/mannose:H+ symporter.
     
 0.630
bioB
Biotin synthetase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.
  
    0.625
ptsG
Phosphotransferase system (PTS) glucose-specific enzyme IICBA component.
      
 0.507
yngK
Conserved protein YngK.
       0.503
BL01922
Hypothetical protein.
  
     0.481
dltB
DltB; Could be involved in the transport of activated D-alanine through the membrane.
  
   
 0.475
BL03207
Conserved hypothetical protein.
  
     0.465
yclI
Hypothetical membrane protein YclI.
  
     0.421
BL03155
Response regulator aspartate phosphatase.
  
     0.409
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.