STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arsCArsenate reductase; Catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)]. (139 aa)    
Predicted Functional Partners:
BL05197
Hypothetical DNA-binding protein.
 
  
 0.908
trxA
Thioredoxin; Belongs to the thioredoxin family.
  
 
 0.837
ydfA
Arsenical pump membrane protein; Involved in arsenical resistance. Thought to form the channel of an arsenite pump; Belongs to the ArsB family.
 
   
 0.815
yrkH
Conserved protein YrkH.
  
   0.786
BL02060
Metallo-beta-lactamase/rhodanese-like domain protein.
  
   0.785
yitJ
Homocysteine S-methyltransferase.
    
  0.726
mntR
Transcriptional regulator; Central regulator of manganese homeostasis. Belongs to the DtxR/MntR family.
      
 0.549
dhbF
DhbF.
  
 
 0.533
mntH
Manganese transporter; H(+)-stimulated, divalent metal cation uptake system. Belongs to the NRAMP family.
      
 0.523
ytxJ
YtxJ.
  
 
 0.515
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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