STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
yisTConserved protein YisT. (171 aa)    
Predicted Functional Partners:
ydfO
Glyoxalase domain protein YdfO.
  
   
 0.779
yizA
Hypothetical protein.
  
   
 0.748
ykcA
Glyoxalase/Bleomycin resistance protein/dioxygenase domain superfamily protein.
     
 0.724
ykkA
Conserved hypothetical protein YkkA.
      
 0.722
BL01147
Hypothetical protein.
      
 0.595
yuaE
Hypothetical protein.
      
 0.594
BL02709
Conserved hypothetical protein.
  
     0.585
BL01876
Hypothetical protein.
       0.501
BL05213
Hypothetical protein.
       0.462
BL01922
Hypothetical protein.
  
     0.431
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.