STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BL01876Hypothetical protein. (154 aa)    
Predicted Functional Partners:
BL05213
Hypothetical protein.
       0.705
cotF
Spore coat protein F.
  
    0.672
yraD
YraD.
  
    0.605
sspH
Small acid-soluble spore protein; Belongs to the SspH family.
  
     0.568
yuaC
Hypothetical protein; Belongs to the GbsR family.
  
     0.562
yjbA
Conserved protein YjbA; Belongs to the UPF0736 family.
  
     0.560
yraE
YraE.
  
     0.543
yvbF
Conserved protein YvbF; Belongs to the GbsR family.
  
     0.538
yabQ
Essential protein for formation of the spore cortex YabQ.
  
     0.503
yisT
Conserved protein YisT.
       0.501
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.