STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BL01893Putative phosphatase. (728 aa)    
Predicted Functional Partners:
BL02084
SAM dependent methyltransferase.
   
   0.710
BL03050
Putative SAM methyltransferase.
   
   0.710
BL03224
Hypothetical protein.
   
   0.710
BL05017
SAM (and some other nucleotide) binding motif,Generic methyltransferase.
   
   0.710
BL05185
Hypothetical protein.
  
     0.534
BL02410
Hypothetical protein; May be related to nikS, involved in the assembly of antibiotic nikkomycin.
  
     0.505
BL05243
Hypothetical protein; Belongs to the small heat shock protein (HSP20) family.
       0.497
BL02072
Hypotehtical protein.
  
     0.449
BL01892
Conserved hypothetical protein.
       0.418
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.