STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BL01925Hypothetical protein. (221 aa)    
Predicted Functional Partners:
BL01926
Hypothetical protein.
       0.811
BL01927
Hypothetical protein.
       0.802
BL01924
Putative ribonucleoside-triphosphate reductase activating protein.
       0.789
BL01928
Cell-division protein and general stress protein (class III heat-shock).
       0.770
comEC
ComEC.
  
  
 0.649
comC
DNA-binding protein.
   
  
 0.630
comGB
Probably part of the DNA transport machinery ComGB.
  
  
 0.561
comGA
ComGA.
  
  
 0.543
comFA
Late competence protein.
   
  
 0.536
comGD
Probably part of the DNA transport machinery ComGD.
   
  
 0.516
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.