STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yocH-2Peptidoglycan-binding protein. (244 aa)    
Predicted Functional Partners:
xkdP
Hypothetical phage related protein.
  
 
 0.816
guaA
GMP synthetase; Catalyzes the synthesis of GMP from XMP.
    
  0.770
cinA
Competence-damage inducible protein; Belongs to the CinA family.
  
 
  0.762
yhcR
Nucleic acid-binding hydrolase YhcR.
    
 0.757
guaB
Inosine-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
  0.718
cwlO
Putative peptidoglycan hydrolase, DL-endopeptidase II family; Shows a cell wall hydrolytic DL-endopeptidase activity. Belongs to the peptidase C40 family.
 
  
 0.672
yrvJ
N-acetylmuramoyl-L-alanine amidase YrvJ.
  
 
 0.640
yngK
Conserved protein YngK.
      
 0.594
lytD
N-acetylglucosaminidase (major autolysin), Glycoside Hydrolase Family 73.
   
    0.594
cwlC
N-acetylmuramoyl-L-alanine amidase.
  
 
 0.564
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.