STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BL01966Hypothetical protein. (172 aa)    
Predicted Functional Partners:
BL01965
Conserved hypothetical protein.
 
    0.948
BL01967
Conserved hyopothetical protein.
 
    0.885
BL02828
Hypothetical protein.
  
     0.617
BL02793
Hypothetical protein.
  
     0.599
ytzH
YtzH.
  
     0.589
yshE
Conserved membrane protein YshE.
  
     0.549
yjcG
Conserved protein YjcG; Belongs to the 2H phosphoesterase superfamily. YjcG family.
 
     0.546
yjcH
Conserved protein,putative carbohydrate esterase family 1, YjcH.
 
     0.486
BL03287
Putative hydrolase.
  
     0.479
seaA
Hypothetical protein; Involved in spore envelope assembly.
  
     0.470
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.