Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
yngGPutative hydroxymethylglutaryl-CoA lyase. (303 aa)    
Predicted Functional Partners:
yngF
Enoyl-CoA hydratase/isomerase YngF; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 
 0.986
yngH
Carbamoyl-phosphate synthase L chain, ATP binding.
 
  
 0.971
mmgA
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.971
yodS
Coenzyme A transferase.
 
 
 0.963
yodR
Coenzyme A transferase.
 
 
 0.961
yngE
Carboxyl transferase.
 
 
 0.961
yngI
AMP-dependent synthetase and ligase.
  
 0.949
yngJ
Acyl-CoA dehydrogenase.
 
 0.933
yusK
Putative acetyl-CoA C-acyltransferase YusK; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.933
BL01863
Putative formate C-acetyltransferase.
     
 0.902
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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